Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EPR76364.1Hypothetical protein. (176 aa)    
Predicted Functional Partners:
EPR76365.1
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit.
 
  
 0.894
EPR76363.1
Regulatory protein GntR, HTH.
 
     0.867
EPR75229.1
Threonine dehydratase, catabolic.
   
 
  0.772
EPR76361.1
2-dehydropantoate 2-reductase.
 
     0.750
EPR76362.1
Succinate-semialdehyde dehydrogenase [NADP+].
  
  0.696
EPR76358.1
Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific).
  
     0.676
EPR77335.1
ThiJ/PfpI family protein.
  
 
 0.672
EPR76366.1
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
 
 
  0.662
trpB
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
   
  0.658
EPR76347.1
2-dehydropantoate 2-reductase.
  
     0.650
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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