Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EPR76375.1Signal transduction histidine kinase. (570 aa)    
Predicted Functional Partners:
EPR76376.1
Response regulator receiver:Transcriptional regulatory protein, C- terminal.
 
 0.983
EPR76365.1
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit.
    
 0.951
EPR77610.1
DNA-binding response regulator MtrA.
 
 0.933
EPR75935.1
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex; 2-oxoglutarate dehydrogenase E1 component.
    
 0.923
EPR76295.1
Phosphate regulon transcriptional regulatory protein PhoB (SphR).
 
 0.890
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
    
 0.888
EPR77127.1
Putative transcriptional regulator.
 
 0.883
EPR77160.1
Two-component system, regulatory protein.
 
 0.883
EPR76752.1
Hypothetical protein.
   
 0.851
EPR76288.1
Transcriptional regulator, GlnR family.
 
 0.847
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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