Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EPR76337.1Multimodular transpeptidase-transglycosylase. (850 aa)    
Predicted Functional Partners:
EPR75543.1
Cell division protein FtsI.
 
 
 0.958
EPR75068.1
Cell division protein FtsI.
 
 
 0.952
EPR76338.1
Putative secreted protein.
       0.840
EPR76850.1
Large Ala/Glu-rich protein.
 
 
 
 0.833
EPR75556.1
Possibly a cell division protein, antigen 84 in Mycobacteria.
 
 
 
 0.831
EPR76746.1
D-alanyl-D-alanine carboxypeptidase.
     
 0.789
EPR75636.1
D-alanyl-D-alanine carboxypeptidase.
  
 
 0.732
murE
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.
 
   
 0.710
EPR75070.1
Serine/threonine-protein kinase PknB.
  
 
 0.653
EPR76335.1
RidA.
       0.649
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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