STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR76249.1Spermidine acetyltransferase. (150 aa)    
Predicted Functional Partners:
EPR76346.1
Cupin 2.
    
  0.781
EPR75077.1
Hypothetical protein.
  
     0.756
EPR77278.1
Phosphoglycerate mutase.
  
     0.726
EPR76893.1
Hypothetical protein.
  
     0.722
EPR75301.1
ABC transporter, permease protein.
  
     0.719
EPR76949.1
Hypothetical protein.
  
     0.718
EPR76037.1
Hypothetical protein.
  
     0.717
EPR77600.1
Hypothetical protein.
  
     0.710
EPR76411.1
Phage-related protein.
  
     0.700
EPR76248.1
DNA-binding protein.
       0.698
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.