Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR76256.1Hypothetical protein. (145 aa)    
Predicted Functional Partners:
EPR76255.1
Thiamin biosynthesis lipoprotein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
  
 0.961
EPR76254.1
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
     0.954
EPR75136.1
Hypothetical protein.
  
     0.584
EPR75902.1
Hypothetical protein.
  
     0.531
EPR76257.1
Glucosamine-6-phosphate deaminase.
       0.524
EPR77486.1
Putative regulatory protein.
  
     0.511
EPR77426.1
Hypothetical protein.
  
     0.484
EPR76253.1
Hypothetical protein.
       0.452
EPR76372.1
Hypothetical protein.
  
     0.447
EPR76407.1
Hypothetical protein.
  
     0.446
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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