STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR76267.1Isochorismatase. (201 aa)    
Predicted Functional Partners:
EPR76266.1
Hypothetical protein.
       0.661
EPR76265.1
Putative aldose 1-epimerase.
  
    0.569
EPR76268.1
Putative UDP-glucose-4-epimerase.
  
    0.560
EPR75638.1
NAD-dependent protein deacetylase of SIR2 family.
  
 0.454
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
   0.446
EPR75800.1
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
  
 
 0.445
EPR77038.1
Quinolinate phosphoribosyltransferase; Belongs to the NadC/ModD family.
   
 0.432
EPR76264.1
Galactokinase; Belongs to the GHMP kinase family.
  
    0.422
EPR75560.1
NADH-FMN oxidoreductase.
  
 
  0.416
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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