STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR76301.1Putative PTS family protein. (124 aa)    
Predicted Functional Partners:
EPR76299.1
PTS system, glucitol/sorbitol-specific IIC component.
 
 
 0.998
EPR76300.1
PTS system protein.
 
 
 0.997
EPR76302.1
Hypothetical protein.
  
  
 0.967
EPR76303.1
Oxidoreductase, short-chain dehydrogenase/reductase family.
 
     0.892
EPR76307.1
Phosphotransferase system, phosphocarrier protein HPr.
    
  0.846
EPR76308.1
PTS system, galactitol-specific IIC component.
 
   
 0.777
EPR76310.1
PTS system, galactitol-specific IIA component.
 
    0.764
EPR76309.1
PTS system, galactitol-specific IIB component.
  
     0.756
EPR76311.1
Sorbitol operon transcription regulator.
 
     0.680
EPR76306.1
Dihydrolipoamide acetyltransferase component (E2) of acetoin dehydrogenase complex.
 
     0.610
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.