Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EPR76302.1Hypothetical protein. (133 aa)    
Predicted Functional Partners:
EPR76301.1
Putative PTS family protein.
  
  
 0.967
EPR76299.1
PTS system, glucitol/sorbitol-specific IIC component.
  
  
 0.898
EPR76300.1
PTS system protein.
  
  
 0.870
EPR76303.1
Oxidoreductase, short-chain dehydrogenase/reductase family.
       0.553
EPR76304.1
Acetoin dehydrogenase E1 component alpha-subunit.
       0.494
EPR76305.1
Acetoin dehydrogenase E1 component beta-subunit.
       0.494
EPR76306.1
Dihydrolipoamide acetyltransferase component (E2) of acetoin dehydrogenase complex.
       0.494
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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