STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR76175.1Ferric iron ABC transporter, iron-binding protein. (346 aa)    
Predicted Functional Partners:
EPR76174.1
Ferric iron ABC transporter, permease protein.
 
 
  0.979
EPR76173.1
ABC transporter component; Belongs to the ABC transporter superfamily.
 
 
  0.936
EPR77150.1
Ferric iron ABC transporter, permease protein.
 
 
  0.913
EPR76762.1
Ferric iron ABC transporter, permease protein.
 
 
  0.913
EPR76808.1
Ferric iron ABC transporter, permease protein.
 
 
  0.886
EPR76176.1
Glycosyl hydrolase, BNR repeat precursor.
       0.773
EPR76172.1
MFS transporter.
       0.768
EPR76763.1
ABC transporter-like protein; Belongs to the ABC transporter superfamily.
 
 
  0.665
EPR76809.1
Fe3+/thiamine transport system, secreted component; ABC transporter substrate-binding protein.
  
  
 
0.617
EPR76177.1
Hypothetical protein.
       0.542
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.