Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR76058.1Hypothetical protein. (53 aa)    
Predicted Functional Partners:
EPR75446.1
TPR-repeat-containing protein.
  
 
 0.714
EPR75528.1
Chromosome (plasmid) partitioning protein ParA.
   
   0.549
EPR75434.1
Chromosome (plasmid) partitioning protein ParA; Sporulation initiation inhibitor protein Soj.
   
   0.549
EPR75089.1
Chromosome (plasmid) partitioning protein ParA; Sporulation initiation inhibitor protein Soj.
   
   0.549
EPR76059.1
Glycosyltransferase related protein.
       0.539
EPR76060.1
Hypothetical protein.
       0.491
EPR76061.1
Hypothetical protein.
       0.491
EPR76062.1
Hypothetical protein.
       0.465
EPR76772.1
Diacylglycerol kinase-related protein.
     
  0.453
EPR76057.1
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase.
       0.446
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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