STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR76065.12-hydroxy-3-oxopropionate reductase. (310 aa)    
Predicted Functional Partners:
EPR76064.1
Alcohol dehydrogenase.
 
  
  0.892
EPR76063.1
Succinate-semialdehyde dehydrogenase [NADP+]; Belongs to the aldehyde dehydrogenase family.
  
 
  0.857
EPR76087.1
Enoyl-CoA hydratase; 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase.
  
 
 0.856
EPR76066.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
  0.831
EPR75209.1
Methylmalonate-semialdehyde dehydrogenase.
 
 
  0.802
EPR76067.1
Mandelate racemase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
    0.799
EPR76896.1
Hypothetical protein; Belongs to the glycerate kinase type-1 family.
  
 
  0.783
EPR76910.1
Methylcrotonyl-CoA carboxylase biotin-containing subunit.
  
 
  0.776
EPR76593.1
Biotin carboxyl carrier protein of acetyl-CoA carboxylase.
  
 
  0.776
EPR75141.1
Acyl-coenzyme A oxidase 1, peroxisomal.
  
 
  0.776
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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