STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EPR75974.1Putative serine/threonine-protein kinase pknK. (475 aa)    
Predicted Functional Partners:
EPR75973.1
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
 
 
 0.935
EPR75975.1
Hypothetical protein.
 
  
 0.887
EPR75977.1
Hypothetical protein.
 
     0.882
EPR75978.1
Transglutaminase-like enzyme.
 
     0.844
EPR76752.1
Hypothetical protein.
    
 0.840
EPR75980.1
Ribonuclease E.
 
 
   0.831
EPR75525.1
FHA domain containing protein.
  
 
 
 0.820
EPR75066.1
Serine/threonine phosphatase PPP.
 
 
 0.817
EPR75972.1
Hypothetical protein.
 
 
   0.799
ribA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
  
 
 0.729
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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