Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR75977.1Hypothetical protein. (449 aa)    
Predicted Functional Partners:
EPR75978.1
Transglutaminase-like enzyme.
 
    0.960
EPR75975.1
Hypothetical protein.
 
     0.952
EPR75976.1
MoxR-like ATPase.
 
  
 0.913
EPR75980.1
Ribonuclease E.
 
     0.883
EPR75974.1
Putative serine/threonine-protein kinase pknK.
 
     0.882
EPR75972.1
Hypothetical protein.
 
     0.828
EPR75979.1
Hypothetical protein.
       0.682
EPR75798.1
Putative integral membrane transport protein.
  
     0.591
EPR75973.1
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
       0.559
EPR75613.1
Putative integral membrane transport protein.
  
     0.519
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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