Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EPR75983.1Putrescine ABC transporter putrescine-binding protein PotF; TCDB 3.A.1.11.2. (400 aa)    
Predicted Functional Partners:
EPR76275.1
Putrescine transport system permease protein PotI; TCDB 3.A.1.11.2.
 
  0.930
EPR75687.1
Spermidine Putrescine ABC transporter permease component potC; TCDB _3.A.1.11.1.
 
  0.918
EPR75888.1
Spermidine Putrescine ABC transporter permease component potC; TCDB _3.A.1.11.1.
 
  0.916
EPR76276.1
Putrescine transport system permease protein PotH; TCDB 3.A.1.11.2.
  
 
  0.867
potA
Putrescine transport ATP-binding protein PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  
  0.850
EPR75686.1
Spermidine Putrescine ABC transporter permease component PotB; TCDB 3.A.1.11.1.
  
 
  0.827
EPR75887.1
Spermidine Putrescine ABC transporter permease component PotB; TCDB 3.A.1.11.1.
  
 
  0.826
EPR77512.1
Spermidine Putrescine ABC transporter permease component potC; TCDB _3.A.1.11.1.
  
  0.817
EPR77562.1
Binding-protein-dependent transport systems inner membrane component.
  
  0.747
EPR77561.1
Putative ABC-transporter transport protein.
   
  0.669
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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