STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR75986.1OsmC/Ohr family protein. (156 aa)    
Predicted Functional Partners:
EPR76920.1
Hemoglobin-like protein HbO.
      0.798
EPR76923.1
Hemoglobin-like protein HbO.
      0.775
EPR75985.1
Hypothetical protein of L-Asparaginase type 2-like superfamily.
       0.602
EPR75987.1
FKBP-type peptidyl-prolyl cis-trans isomerases 1.
       0.523
dxr
1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.
       0.454
EPR76930.1
Non-specific DNA-binding protein Dps; Iron-binding ferritin-like antioxidant protein; Ferroxidase; Belongs to the Dps family.
  
  
 0.450
EPR77067.1
Non-specific DNA-binding protein Dps; Iron-binding ferritin-like antioxidant protein; Ferroxidase; Belongs to the Dps family.
  
  
 0.450
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.