STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR76000.1Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A. (258 aa)    
Predicted Functional Partners:
EPR76168.1
3-oxoadipate CoA-transferase subunit B.
 0.999
EPR76001.1
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B.
 0.999
EPR75990.1
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.894
EPR75999.1
Hydrolase, alpha/beta fold family.
  
 
 0.867
EPR76087.1
Enoyl-CoA hydratase; 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase.
  
 
 0.860
EPR75998.1
D-beta-hydroxybutyrate dehydrogenase.
  
 
  0.854
EPR75993.1
Branched-chain amino acid transport ATP-binding protein LivF; TCDB 3.A.1.4.1.
    
  0.817
EPR75912.1
Enoyl-CoA hydratase.
  
 
 0.788
EPR75996.1
Long-chain-fatty-acid--CoA ligase.
  
  
 0.785
EPR75995.1
Branched-chain amino acid transport system permease protein LivM; TCDB 3.A.1.4.1; Belongs to the binding-protein-dependent transport system permease family.
       0.784
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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