STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR75902.1Hypothetical protein. (287 aa)    
Predicted Functional Partners:
argS
Arginyl-tRNA synthetase.
       0.824
EPR76968.1
Hypothetical protein.
  
     0.768
EPR76991.1
Hypothetical protein.
  
     0.737
EPR75249.1
CAAX amino terminal protease family.
  
     0.731
EPR76100.1
Putative hexapeptide transferase family protein.
  
     0.730
EPR76869.1
Hypothetical protein.
 
     0.707
EPR77594.1
Polysaccharide biosynthesis protein.
  
     0.706
EPR76380.1
Hypothetical protein.
  
     0.703
EPR76978.1
Mucin-like protein 1 precursor.
  
     0.701
EPR75716.1
Hypothetical protein.
  
     0.696
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.