Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR75923.1Putative membrane protein. (361 aa)    
Predicted Functional Partners:
EPR77247.1
Hypothetical protein.
  
     0.656
EPR75792.1
Putative integral membrane protein.
 
     0.640
EPR77590.1
Exopolysaccharide production protein.
 
    0.588
EPR75922.1
Short chain dehydrogenase.
       0.586
EPR76380.1
Hypothetical protein.
  
     0.551
EPR75924.1
O-succinylhomoserine sulfhydrylase.
       0.541
EPR76439.1
Hypothetical protein.
  
     0.507
EPR76490.1
Hypothetical protein.
  
     0.470
EPR76241.1
Putative membrane protein.
  
     0.446
EPR76408.1
Hypothetical protein.
  
     0.438
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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