STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsAPutative L-rhamnose ABC transporter, ATP-binding component; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (527 aa)    
Predicted Functional Partners:
EPR75837.1
Putative L-rhamnose ABC transporter, transmembrane component 2; Belongs to the binding-protein-dependent transport system permease family.
  0.986
EPR75838.1
Putative L-rhamnose ABC transporter, transmembrane component 1; Belongs to the binding-protein-dependent transport system permease family.
  0.985
EPR75839.1
Putative L-rhamnose ABC transporter, substrate-binding component.
 
 0.959
EPR75451.1
Ribose ABC transport system, periplasmic ribose-binding protein RbsB; TCDB 3.A.1.2.1.
 
 0.942
EPR75453.1
Putative sugar ABC transport system, permease protein YphD; Belongs to the binding-protein-dependent transport system permease family.
  0.941
EPR75811.1
L-arabinose transport system permease protein; TCDB 3.A.1.2.2; Belongs to the binding-protein-dependent transport system permease family.
 
 0.919
EPR75835.1
Transcriptional regulator of rhamnose utilization, LacI family.
 
 
  0.616
EPR75840.1
Putative L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
  
 0.593
EPR75325.1
Ribose ABC transport system, permease protein RbsC; TCDB 3.A.1.2.1; Belongs to the binding-protein-dependent transport system permease family.
  
  0.578
EPR75326.1
Ribose ABC transport system, permease protein RbsC; TCDB 3.A.1.2.1; Belongs to the binding-protein-dependent transport system permease family.
 
  
  0.555
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.