Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EPR75842.1L-rhamnose isomerase. (388 aa)    
Predicted Functional Partners:
EPR75844.1
Rhamnulokinase.
 
  
 0.978
EPR75841.1
L-rhamnose mutarotase.
 
  
  0.976
EPR75843.1
Putative rhamnulose-1-phosphate aldolase; Predicted lactaldehyde dehydrogenase.
 
  
 0.976
EPR75840.1
Putative L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
     0.864
EPR75272.1
PTS system, fructose-specific IIB component; PTS system, fructose-specific IIC component.
     
  0.830
EPR75839.1
Putative L-rhamnose ABC transporter, substrate-binding component.
 
     0.784
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
  
  
 0.696
xylB
Xylulose kinase.
 
  
 0.658
EPR75835.1
Transcriptional regulator of rhamnose utilization, LacI family.
 
     0.558
EPR75837.1
Putative L-rhamnose ABC transporter, transmembrane component 2; Belongs to the binding-protein-dependent transport system permease family.
 
     0.556
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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