Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EPR75846.1Transcriptional regulator, GntR family. (210 aa)    
Predicted Functional Partners:
EPR75847.1
L-lactate dehydrogenase; Overlaps CDS with the same product name; overlaps another CDS with the same product name.
  
    0.766
EPR75848.1
L-lactate dehydrogenase; Overlaps CDS with the same product name; overlaps another CDS with the same product name.
  
    0.766
EPR76363.1
Regulatory protein GntR, HTH.
  
     0.748
EPR75450.1
Transcriptional regulator, GntR family.
  
     0.738
EPR76943.1
Transcriptional regulator, GntR family.
  
     0.675
EPR75845.1
Oxidoreductase.
       0.537
EPR75849.1
Transmembrane transport protein.
       0.525
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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