STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR75887.1Spermidine Putrescine ABC transporter permease component PotB; TCDB 3.A.1.11.1. (305 aa)    
Predicted Functional Partners:
EPR75888.1
Spermidine Putrescine ABC transporter permease component potC; TCDB _3.A.1.11.1.
  0.992
potA-2
Putrescine transport ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  0.970
EPR77512.1
Spermidine Putrescine ABC transporter permease component potC; TCDB _3.A.1.11.1.
  0.968
EPR75687.1
Spermidine Putrescine ABC transporter permease component potC; TCDB _3.A.1.11.1.
  0.967
EPR76275.1
Putrescine transport system permease protein PotI; TCDB 3.A.1.11.2.
  0.957
EPR75886.1
ABC transporter, periplasmic spermidine putrescine-binding protein PotD; TCDB 3.A.1.11.1.
 
 
  0.954
EPR77509.1
Putrescine transport ATP-binding protein PotA; TCDB 3.A.1.11.1; Belongs to the ABC transporter superfamily.
 
  0.933
EPR75685.1
Putrescine transport ATP-binding protein PotA; TCDB 3.A.1.11.1; Belongs to the ABC transporter superfamily.
 
  0.924
potA
Putrescine transport ATP-binding protein PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  0.921
EPR75688.1
ABC transporter, periplasmic spermidine putrescine-binding protein PotD; TCDB 3.A.1.11.1.
 
 
  0.898
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.