Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EPR75687.1Spermidine Putrescine ABC transporter permease component potC; TCDB _3.A.1.11.1. (270 aa)    
Predicted Functional Partners:
EPR75688.1
ABC transporter, periplasmic spermidine putrescine-binding protein PotD; TCDB 3.A.1.11.1.
  0.998
EPR75886.1
ABC transporter, periplasmic spermidine putrescine-binding protein PotD; TCDB 3.A.1.11.1.
  0.981
EPR75685.1
Putrescine transport ATP-binding protein PotA; TCDB 3.A.1.11.1; Belongs to the ABC transporter superfamily.
 
  0.980
EPR75686.1
Spermidine Putrescine ABC transporter permease component PotB; TCDB 3.A.1.11.1.
 
0.974
EPR75887.1
Spermidine Putrescine ABC transporter permease component PotB; TCDB 3.A.1.11.1.
  0.967
EPR76278.1
Putrescine ABC transporter putrescine-binding protein PotF; TCDB 3.A.1.11.2.
  0.944
potA-2
Putrescine transport ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  
  0.921
EPR77509.1
Putrescine transport ATP-binding protein PotA; TCDB 3.A.1.11.1; Belongs to the ABC transporter superfamily.
  
  0.919
EPR75983.1
Putrescine ABC transporter putrescine-binding protein PotF; TCDB 3.A.1.11.2.
 
  0.918
potA
Putrescine transport ATP-binding protein PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  
  0.915
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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