Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EPR75733.1Transcriptional regulator. (293 aa)    
Predicted Functional Partners:
EPR75739.1
Hypothetical protein.
 
  
  0.874
phnC-2
Phosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
       0.707
EPR75735.1
Phosphonate ABC transporter permease protein phnE1; TCDB 3.A.1.9.1.
       0.697
EPR75736.1
Phosphonate ABC transporter permease protein phnE2; TCDB 3.A.1.9.1.
       0.697
EPR75734.1
2',3'-cyclic-nucleotide 2'-phosphodiesterase; Belongs to the 5'-nucleotidase family.
       0.693
EPR75738.1
Phosphonate ABC transporter phosphate-binding periplasmic component; TCDB 3.A.1.9.1.
       0.559
EPR76365.1
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit.
     
  0.465
EPR75139.1
2-dehydro-3-deoxyphosphogluconate aldolase.
 
  
 0.447
EPR75272.1
PTS system, fructose-specific IIB component; PTS system, fructose-specific IIC component.
     
 0.408
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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