Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR75745.1Xaa-Pro aminopeptidase. (337 aa)    
Predicted Functional Partners:
EPR75200.1
Hypothetical protein.
  
     0.742
EPR75744.1
Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family.
       0.682
EPR75077.1
Hypothetical protein.
  
     0.598
EPR75104.1
Hypothetical protein.
  
     0.589
EPR75746.1
Putative metal-dependent phosphoesterases (PHP family).
       0.585
EPR75747.1
Cystathionine beta-lyase, type II.
       0.550
EPR76408.1
Hypothetical protein.
  
     0.542
EPR77633.1
Hypothetical protein.
  
     0.500
EPR77395.1
Hypothetical protein.
  
     0.499
EPR77256.1
Hypothetical protein.
  
     0.496
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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