STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR75747.1Cystathionine beta-lyase, type II. (392 aa)    
Predicted Functional Partners:
EPR76314.1
O-succinylhomoserine sulfhydrylase.
 
 
 0.938
EPR75924.1
O-succinylhomoserine sulfhydrylase.
 
 
 0.923
EPR77399.1
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.911
EPR75900.1
Homoserine dehydrogenase.
    
 0.899
EPR75229.1
Threonine dehydratase, catabolic.
    
  0.876
pepA
Cytosol aminopeptidase PepA; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
  
 
  0.873
EPR76017.1
Phosphopantothenoylcysteine decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.
    
  0.871
EPR76944.1
1-aminocyclopropane-1-carboxylate deaminase.
    
  0.822
EPR77435.1
Aspartate aminotransferase.
  
  
0.800
EPR75782.1
Aspartate aminotransferase.
     
0.783
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.