Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR75764.1Rhs element Vgr protein. (612 aa)    
Predicted Functional Partners:
EPR76885.1
Multi-domain regulatory protein.
  
     0.733
EPR76734.1
Putative transcriptional regulator.
  
     0.723
EPR75469.1
Hypothetical protein.
  
  
 0.621
nadE
NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.
       0.519
EPR75405.1
Lead, cadmium, zinc and mercury transporting ATPase; Copper-translocating P-type ATPase.
     
 0.492
EPR76541.1
Hypothetical protein.
 
     0.466
EPR77268.1
Hypothetical protein.
  
     0.464
EPR75479.1
Zn-dependent protease with chaperone function.
 
     0.433
EPR77455.1
Hypothetical protein.
  
     0.421
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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