Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EPR75775.1Transcriptional regulator, MarR family. (166 aa)    
Predicted Functional Partners:
EPR75777.1
Aromatic ring-opening dioxygenase.
 
  
 0.896
EPR75779.1
Ferredoxin.
 
     0.815
EPR75774.1
Putative cytochrome P450 hydroxylase.
 
     0.803
EPR75769.1
Acetoacetate decarboxylase.
  
     0.760
EPR75778.1
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase.
 
     0.669
EPR75776.1
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
  
  0.658
EPR75780.1
Ferredoxin reductase.
 
     0.648
EPR75768.1
Amino acid permease family protein.
  
     0.512
EPR75773.1
Aromatic-L-amino-acid decarboxylase.
       0.414
EPR75384.1
Hypothetical protein.
  
 
   0.405
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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