STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR75788.1CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. (272 aa)    
Predicted Functional Partners:
EPR75789.1
Glycosyltransferase.
 
     0.959
EPR75787.1
Succinoglycan biosynthesis protein ExoA.
 
     0.953
EPR75792.1
Putative integral membrane protein.
 
     0.702
EPR76598.1
Hypothetical protein.
  
     0.582
EPR76248.1
DNA-binding protein.
 
     0.546
EPR77590.1
Exopolysaccharide production protein.
 
     0.540
EPR76887.1
Hypothetical protein.
  
     0.526
EPR75786.1
Serine protease.
       0.512
EPR77382.1
Hypothetical protein.
  
     0.509
EPR75892.1
Hypothetical protein.
  
     0.497
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.