Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR75793.1Hypothetical protein. (269 aa)    
Predicted Functional Partners:
EPR74999.1
Glutamate synthase [NADPH] large chain.
     
  0.830
EPR75374.1
Proline dehydrogenase (Proline oxidase); Delta-1-pyrroline-5-carboxylate dehydrogenase.
  
  
  0.824
EPR75794.1
Polysaccharide ABC transporter, ATP-binding protein.
       0.621
EPR75795.1
O-antigen export system permease protein RfbD.
       0.616
EPR76851.1
Hypothetical protein.
  
     0.608
EPR76846.1
Hypothetical protein.
  
     0.554
EPR75796.1
UDP-N-acetylglucosamine pyrophosphorylase-like protein.
 
     0.537
EPR77127.1
Putative transcriptional regulator.
  
     0.455
EPR77095.1
Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type.
  
  
  0.449
EPR76023.1
Integral membrane protein.
  
     0.444
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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