Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR75799.1Hypothetical protein. (86 aa)    
Predicted Functional Partners:
whiB-2
WhiB-like transcription regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.745
EPR75078.1
Hypothetical protein.
  
     0.720
EPR75798.1
Putative integral membrane transport protein.
       0.714
EPR75797.1
ABC-type multidrug transport system, ATPase component.
       0.695
EPR75599.1
Peptidylprolyl isomerase.
  
     0.681
EPR75527.1
Transcriptional regulator, MerR family.
  
     0.634
whiB
Sporulation regulatory protein WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.614
EPR77622.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
     0.561
EPR75241.1
Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage.
  
     0.552
EPR76506.1
Inosine-5'-monophosphate dehydrogenase.
  
     0.542
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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