STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR75818.1Type II/IV secretion system protein TadC, associated with Flp pilus assembly. (312 aa)    
Predicted Functional Partners:
EPR75817.1
Flp pilus assembly protein TadB.
 
  
 0.991
EPR75816.1
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily.
 
  
 0.975
EPR75821.1
Hypothetical protein.
 
    0.931
EPR75822.1
Putative membrane/secreted protein.
 
     0.878
EPR75820.1
Hypothetical protein.
 
     0.873
EPR75823.1
Hypothetical protein.
 
     0.841
EPR76330.1
Integral membrane protein.
 
  
 0.827
EPR77620.1
Hypothetical protein.
 
    0.813
EPR77621.1
Flagellar synthesis regulator FleN.
 
  
 0.787
EPR76331.1
Flp pilus assembly protein, ATPase CpaF.
 
  
 0.774
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.