Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR75469.1Hypothetical protein. (482 aa)    
Predicted Functional Partners:
EPR75468.1
Putative membrane protein.
 
     0.709
EPR75764.1
Rhs element Vgr protein.
  
  
 0.621
EPR77252.1
Hypothetical protein.
  
     0.610
EPR75470.1
Hypothetical protein.
       0.499
EPR75471.1
Hypothetical protein.
       0.499
EPR75472.1
Hypothetical protein.
       0.499
EPR75405.1
Lead, cadmium, zinc and mercury transporting ATPase; Copper-translocating P-type ATPase.
     
 0.492
recX
Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family.
 
     0.476
EPR75806.1
Putative oxygenase.
  
     0.471
EPR75753.1
ATP-dependent DNA helicase; Overlaps another CDS with the same product name.
 
     0.462
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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