STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR75528.1Chromosome (plasmid) partitioning protein ParA. (249 aa)    
Predicted Functional Partners:
EPR75090.1
Chromosome (plasmid) partitioning protein ParB; Stage 0 sporulation protein J; Belongs to the ParB family.
 
 
 0.936
EPR75446.1
TPR-repeat-containing protein.
  
 
 0.645
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 
 0.624
EPR75529.1
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
       0.612
EPR76707.1
Glycosyl transferase, group 2 family protein.
   
   0.549
EPR76161.1
Cellulose synthase (UDP-forming).
   
   0.549
EPR76058.1
Hypothetical protein.
   
   0.549
EPR76059.1
Glycosyltransferase related protein.
   
   0.549
EPR76060.1
Hypothetical protein.
   
   0.549
EPR75787.1
Succinoglycan biosynthesis protein ExoA.
   
   0.549
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.