STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR75583.1Amine oxidase. (382 aa)    
Predicted Functional Partners:
EPR75386.1
Helicase.
  
 
  0.862
EPR76550.1
Putative helicase.
  
 
  0.860
EPR77250.1
Putative helicase regulator.
    
  0.834
EPR77552.1
Phytoene dehydrogenase.
   
 
 0.716
EPR77553.1
Phytoene synthase.
   
 
 0.716
EPR76125.1
Uncharacterized protein.
    
  0.711
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
     
  0.708
EPR76249.1
Spermidine acetyltransferase.
     
  0.674
EPR77527.1
Omega amidase.
    
 0.662
EPR76826.1
Signal peptidase I; Belongs to the peptidase S26 family.
     
  0.661
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.