Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EPR75610.1Glutathione peroxidase; Belongs to the glutathione peroxidase family. (165 aa)    
Predicted Functional Partners:
EPR75293.1
ATP-dependent helicase hrpA.
    
  0.809
EPR75058.1
Hypothetical protein.
      0.791
EPR75611.1
Hypothetical protein.
  
    0.782
msrA
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
 
 0.735
EPR77250.1
Putative helicase regulator.
   
  0.705
EPR76550.1
Putative helicase.
   
  0.705
EPR75386.1
Helicase.
   
  0.705
EPR77448.1
Catalase.
  
 
 0.677
EPR75669.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
 
 0.671
EPR76868.1
Cytochrome c-type biogenesis protein CcdA.
  
 0.626
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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