Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EPR75634.1Putative esterase. (253 aa)    
Predicted Functional Partners:
EPR76164.1
Mucin-associated surface protein.
   
 0.748
EPR75278.1
Conserved membrane protein.
  
     0.642
EPR75633.1
Putative integral membrane protein.
       0.530
EPR75631.1
DNA or RNA helicases of superfamily II.
 
     0.466
EPR76140.1
DNA polymerase I.
  
     0.441
EPR75281.1
Thymidylate kinase.
    
   0.430
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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