Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EPR75636.1D-alanyl-D-alanine carboxypeptidase. (408 aa)    
Predicted Functional Partners:
EPR75543.1
Cell division protein FtsI.
 
 
 0.917
EPR76746.1
D-alanyl-D-alanine carboxypeptidase.
     
 0.898
EPR75068.1
Cell division protein FtsI.
  
 
 0.895
EPR76717.1
D-alanyl-D-alanine carboxypeptidase.
     
 0.850
EPR76337.1
Multimodular transpeptidase-transglycosylase.
  
 
 0.732
EPR75048.1
Beta-lactamase related protein.
 
  
  0.723
EPR75637.1
Putative rRNA methylase.
   
   0.699
EPR75070.1
Serine/threonine-protein kinase PknB.
   
 
 0.612
EPR77437.1
Penicillin-binding protein.
     
 0.602
EPR75163.1
Beta-lactamase.
     
 0.602
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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