Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EPR75450.1Transcriptional regulator, GntR family. (253 aa)    
Predicted Functional Partners:
EPR75449.1
Hypothetical protein.
       0.746
EPR75846.1
Transcriptional regulator, GntR family.
  
     0.738
EPR75456.1
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
   
 0.554
EPR75451.1
Ribose ABC transport system, periplasmic ribose-binding protein RbsB; TCDB 3.A.1.2.1.
       0.545
EPR75454.1
Demethylmenaquinone methyltransferase.
 
     0.463
EPR76195.1
Transcriptional regulator, IclR family.
  
    0.448
EPR76170.1
Transcriptional regulator, IclR family.
  
    0.428
EPR75452.1
Putative sugar ABC transport system, ATP-binding protein YphE.
  
    0.416
EPR75453.1
Putative sugar ABC transport system, permease protein YphD; Belongs to the binding-protein-dependent transport system permease family.
       0.412
EPR75448.1
Transcriptional regulator, IclR family.
  
    0.411
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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