STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR75433.1Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. (275 aa)    
Predicted Functional Partners:
EPR75432.1
Segregation and condensation protein B.
 
 
 0.999
smc
Chromosome partition protein smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
 
 
 0.985
cmk
Cytidylate kinase.
 
  
 0.946
EPR75431.1
Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.
  
  
 0.912
EPR75434.1
Chromosome (plasmid) partitioning protein ParA; Sporulation initiation inhibitor protein Soj.
 
  
 0.893
EPR75465.1
ATPase involved in DNA repair.
  
 
 0.884
der
GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
 
  
 0.849
EPR76042.1
ATPase involved in DNA repair.
  
 
 0.848
EPR75966.1
Hypothetical protein.
  
 
 0.848
EPR75430.1
Arogenate dehydrogenase.
       0.804
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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