Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR75353.1Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (84 aa)    
Predicted Functional Partners:
EPR75280.1
Addiction module toxin, RelE/StbE.
 
 
 0.947
EPR75378.1
Hypothetical protein.
  
 0.906
EPR77505.1
HipA protein.
  
  
  0.656
EPR77057.1
Hypothetical protein.
  
  
  0.582
EPR77504.1
Putative Transcriptional regulator, helix-turn-helix XRE-family.
  
     0.545
EPR75060.1
HipA protein.
  
  
  0.528
EPR75698.1
Transcriptional modulator of MazE/toxin, MazF; Toxic component of a type II toxin-antitoxin (TA) system.
  
  
 0.498
EPR77533.1
Hypothetical protein.
     
  0.492
EPR77348.1
Hypothetical protein.
     
  0.492
EPR76553.1
Hypothetical protein.
     
 0.414
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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