Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPR75243.1Hypothetical protein. (317 aa)    
Predicted Functional Partners:
EPR75244.1
Histidyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.665
EPR77520.1
Protein of unknown function DUF181.
 
  
 0.623
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
       0.596
EPR77519.1
Protein of unknown function DUF181.
  
  
 0.562
EPR75245.1
Hypothetical protein.
       0.560
EPR75239.1
Serine protease.
       0.528
EPR75240.1
Exopolyphosphatase.
       0.527
EPR75241.1
Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage.
       0.527
EPR77367.1
ABC-2:Amidohydrolase.
   
    0.463
EPR75238.1
NADH dehydrogenase.
       0.452
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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