STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR75199.1Putative exported protein. (204 aa)    
Predicted Functional Partners:
EPR75198.1
N-acetylglutamate synthase; Belongs to the acetyltransferase family.
 
     0.798
EPR75200.1
Hypothetical protein.
       0.777
EPR77601.1
Hypothetical protein.
   
    0.679
EPR76095.1
Hypothetical protein.
  
    0.663
EPR76318.1
Hypothetical protein.
  
     0.565
EPR75556.1
Possibly a cell division protein, antigen 84 in Mycobacteria.
  
     0.565
EPR76047.1
Preprotein translocase subunit YajC; TCDB 3.A.5.1.1.
  
     0.528
EPR76978.1
Mucin-like protein 1 precursor.
  
  
  0.513
EPR75105.1
Hypothetical protein.
  
     0.496
EPR76851.1
Hypothetical protein.
  
     0.495
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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