STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR75026.1Chromosome segregation protein SMC-like protein. (1119 aa)    
Predicted Functional Partners:
EPR75024.1
Hypothetical protein.
 
   0.994
EPR75025.1
Hypothetical protein.
 
 
   0.990
EPR75027.1
Hypothetical protein.
 
     0.958
EPR76847.1
Secreted protein.
  
   0.843
EPR75063.1
Peptidoglycan lytic protein P45.
  
   0.843
EPR77409.1
Hypothetical protein.
  
     0.644
EPR77349.1
HipA.
  
     0.583
EPR77534.1
HipA protein.
  
     0.501
EPR76236.1
Transposase, IS111A/IS1328/IS1533.
  
     0.500
EPR77533.1
Hypothetical protein.
  
     0.497
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.