Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EPR75086.1 | EPR75087.1 | ADILRU_2623 | ADILRU_2624 | Inner membrane protein translocase component YidC, long form. | RNA-binding protein Jag. | 0.986 |
| EPR75086.1 | EPR75090.1 | ADILRU_2623 | ADILRU_2627 | Inner membrane protein translocase component YidC, long form. | Chromosome (plasmid) partitioning protein ParB; Stage 0 sporulation protein J; Belongs to the ParB family. | 0.668 |
| EPR75086.1 | lgt | ADILRU_2623 | ADILRU_2716 | Inner membrane protein translocase component YidC, long form. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.723 |
| EPR75086.1 | rho | ADILRU_2623 | ADILRU_1743 | Inner membrane protein translocase component YidC, long form. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.821 |
| EPR75086.1 | rplP | ADILRU_2623 | ADILRU_1223 | Inner membrane protein translocase component YidC, long form. | LSU ribosomal protein L16p (L10e); Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.678 |
| EPR75086.1 | rplV | ADILRU_2623 | ADILRU_1221 | Inner membrane protein translocase component YidC, long form. | LSU ribosomal protein L22p (L17e); The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.675 |
| EPR75086.1 | rsmG | ADILRU_2623 | ADILRU_2625 | Inner membrane protein translocase component YidC, long form. | rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.894 |
| EPR75086.1 | trpA | ADILRU_2623 | ADILRU_2715 | Inner membrane protein translocase component YidC, long form. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.716 |
| EPR75087.1 | EPR75086.1 | ADILRU_2624 | ADILRU_2623 | RNA-binding protein Jag. | Inner membrane protein translocase component YidC, long form. | 0.986 |
| EPR75087.1 | EPR75090.1 | ADILRU_2624 | ADILRU_2627 | RNA-binding protein Jag. | Chromosome (plasmid) partitioning protein ParB; Stage 0 sporulation protein J; Belongs to the ParB family. | 0.700 |
| EPR75087.1 | EPR76819.1 | ADILRU_2624 | ADILRU_0658 | RNA-binding protein Jag. | KH RNA binding protein YlqC; Belongs to the UPF0109 family. | 0.917 |
| EPR75087.1 | EPR76965.1 | ADILRU_2624 | ADILRU_0804 | RNA-binding protein Jag. | Cytoplasmic axial filament protein CafA and Ribonuclease G. | 0.829 |
| EPR75087.1 | lgt | ADILRU_2624 | ADILRU_2716 | RNA-binding protein Jag. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.697 |
| EPR75087.1 | rho | ADILRU_2624 | ADILRU_1743 | RNA-binding protein Jag. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.691 |
| EPR75087.1 | rplP | ADILRU_2624 | ADILRU_1223 | RNA-binding protein Jag. | LSU ribosomal protein L16p (L10e); Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.690 |
| EPR75087.1 | rplV | ADILRU_2624 | ADILRU_1221 | RNA-binding protein Jag. | LSU ribosomal protein L22p (L17e); The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.688 |
| EPR75087.1 | rsmG | ADILRU_2624 | ADILRU_2625 | RNA-binding protein Jag. | rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.944 |
| EPR75087.1 | trpA | ADILRU_2624 | ADILRU_2715 | RNA-binding protein Jag. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.690 |
| EPR75090.1 | EPR75086.1 | ADILRU_2627 | ADILRU_2623 | Chromosome (plasmid) partitioning protein ParB; Stage 0 sporulation protein J; Belongs to the ParB family. | Inner membrane protein translocase component YidC, long form. | 0.668 |
| EPR75090.1 | EPR75087.1 | ADILRU_2627 | ADILRU_2624 | Chromosome (plasmid) partitioning protein ParB; Stage 0 sporulation protein J; Belongs to the ParB family. | RNA-binding protein Jag. | 0.700 |
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