STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPR75136.1Hypothetical protein. (100 aa)    
Predicted Functional Partners:
EPR75137.1
Inner membrane protein YrbG, predicted calcium/sodium:proton antiporter.
       0.773
EPR75133.1
Heme oxygenase.
 
   
 0.672
EPR75135.1
Hypothetical protein.
       0.651
EPR77486.1
Putative regulatory protein.
  
     0.633
EPR77570.1
Iron ABC transporter permease.
 
    0.608
EPR75902.1
Hypothetical protein.
  
     0.591
EPR76256.1
Hypothetical protein.
  
     0.584
EPR76369.1
Putative membrane protein.
  
     0.582
EPR75138.1
Putative secreted protein.
       0.553
EPR77514.1
ABC transporter (iron.B12.siderophore.hemin), periplasmic substrate-binding component.
  
    0.551
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.