Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EPR75015.1Opine oxidase subunit A. (577 aa)    
Predicted Functional Partners:
EPR76192.1
Putative ferredoxin containing dehydrogenase.
 
  0.905
EPR75653.1
Ferredoxin, 2Fe-2S.
  
 
 0.902
EPR75014.1
Hypothetical protein.
 
     0.805
EPR75017.1
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.
 
    0.799
EPR75016.1
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein).
  
    0.773
EPR75019.1
Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.754
EPR77134.1
Multicopper oxidase.
     
  0.737
EPR76676.1
Respiratory nitrate reductase alpha chain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.732
EPR74999.1
Glutamate synthase [NADPH] large chain.
  
  
 0.713
EPR75018.1
ATP-NAD kinase.
       0.709
Your Current Organism:
Leifsonia rubra
NCBI taxonomy Id: 1348338
Other names: L. rubra CMS 76R, Leifsonia rubra CMS 76R
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