Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM64580.1 | SHM64605.1 | SAMN05443668_1011125 | SAMN05443668_1011126 | Pimeloyl-ACP methyl ester carboxylesterase. | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | 0.828 |
SHM64580.1 | SHM64632.1 | SAMN05443668_1011125 | SAMN05443668_1011127 | Pimeloyl-ACP methyl ester carboxylesterase. | Predicted metal-dependent hydrolase, TIM-barrel fold. | 0.664 |
SHM64580.1 | SHM64657.1 | SAMN05443668_1011125 | SAMN05443668_1011128 | Pimeloyl-ACP methyl ester carboxylesterase. | Predicted metal-dependent hydrolase, TIM-barrel fold. | 0.664 |
SHM64580.1 | SHM64684.1 | SAMN05443668_1011125 | SAMN05443668_1011129 | Pimeloyl-ACP methyl ester carboxylesterase. | Ferredoxin. | 0.477 |
SHM64580.1 | SHM64710.1 | SAMN05443668_1011125 | SAMN05443668_1011130 | Pimeloyl-ACP methyl ester carboxylesterase. | Rieske [2Fe-2S] domain-containing protein. | 0.477 |
SHM64580.1 | SHM64735.1 | SAMN05443668_1011125 | SAMN05443668_1011131 | Pimeloyl-ACP methyl ester carboxylesterase. | Hypothetical protein. | 0.405 |
SHM64605.1 | SHM64580.1 | SAMN05443668_1011126 | SAMN05443668_1011125 | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.828 |
SHM64605.1 | SHM64632.1 | SAMN05443668_1011126 | SAMN05443668_1011127 | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | Predicted metal-dependent hydrolase, TIM-barrel fold. | 0.927 |
SHM64605.1 | SHM64657.1 | SAMN05443668_1011126 | SAMN05443668_1011128 | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | Predicted metal-dependent hydrolase, TIM-barrel fold. | 0.926 |
SHM64605.1 | SHM64684.1 | SAMN05443668_1011126 | SAMN05443668_1011129 | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | Ferredoxin. | 0.477 |
SHM64605.1 | SHM64710.1 | SAMN05443668_1011126 | SAMN05443668_1011130 | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | Rieske [2Fe-2S] domain-containing protein. | 0.548 |
SHM64632.1 | SHM64580.1 | SAMN05443668_1011127 | SAMN05443668_1011125 | Predicted metal-dependent hydrolase, TIM-barrel fold. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.664 |
SHM64632.1 | SHM64605.1 | SAMN05443668_1011127 | SAMN05443668_1011126 | Predicted metal-dependent hydrolase, TIM-barrel fold. | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | 0.927 |
SHM64632.1 | SHM64657.1 | SAMN05443668_1011127 | SAMN05443668_1011128 | Predicted metal-dependent hydrolase, TIM-barrel fold. | Predicted metal-dependent hydrolase, TIM-barrel fold. | 0.822 |
SHM64632.1 | SHM64684.1 | SAMN05443668_1011127 | SAMN05443668_1011129 | Predicted metal-dependent hydrolase, TIM-barrel fold. | Ferredoxin. | 0.548 |
SHM64632.1 | SHM64710.1 | SAMN05443668_1011127 | SAMN05443668_1011130 | Predicted metal-dependent hydrolase, TIM-barrel fold. | Rieske [2Fe-2S] domain-containing protein. | 0.578 |
SHM64657.1 | SHM64580.1 | SAMN05443668_1011128 | SAMN05443668_1011125 | Predicted metal-dependent hydrolase, TIM-barrel fold. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.664 |
SHM64657.1 | SHM64605.1 | SAMN05443668_1011128 | SAMN05443668_1011126 | Predicted metal-dependent hydrolase, TIM-barrel fold. | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | 0.926 |
SHM64657.1 | SHM64632.1 | SAMN05443668_1011128 | SAMN05443668_1011127 | Predicted metal-dependent hydrolase, TIM-barrel fold. | Predicted metal-dependent hydrolase, TIM-barrel fold. | 0.822 |
SHM64657.1 | SHM64684.1 | SAMN05443668_1011128 | SAMN05443668_1011129 | Predicted metal-dependent hydrolase, TIM-barrel fold. | Ferredoxin. | 0.548 |
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