STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM67368.1Acyl dehydratase. (139 aa)    
Predicted Functional Partners:
SHN29555.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D.
  
 0.789
SHN46244.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.768
SHM67400.1
N-terminal half of MaoC dehydratase.
       0.766
SHN27321.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.672
SHN27903.1
Biotin-requiring enzyme.
  
 
 0.657
SHM91308.1
Cytochrome P450.
 
 
 0.637
SHN46564.1
Uncharacterized OB-fold protein, contains Zn-ribbon domain.
 
   0.635
SHM67203.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
     
 0.630
SHM98711.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
     
 0.630
SHN74032.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.616
Your Current Organism:
Cryptosporangium aurantiacum
NCBI taxonomy Id: 134849
Other names: Actinoplanes aurantiacus, C. aurantiacum, DSM 46144, IFO 13967, IMET 9261, IMSNU 22120, JCM 3241, KCC A-0241, KCTC 9529, NBRC 13967, NCIMB 12649, NRRL B-16698, strain 71-C38
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