STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM69598.13-oxoacyl-[acyl-carrier protein] reductase. (240 aa)    
Predicted Functional Partners:
SHM69563.1
AraC-type DNA-binding protein.
       0.752
SHN39924.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
     0.751
SHM37637.1
Glutamate synthase (NADH) large subunit.
     
 0.728
SHN46652.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.719
SHN26624.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
  0.711
SHN45809.1
Phosphocarrier protein FPr; Belongs to the PEP-utilizing enzyme family.
     
 0.705
SHN45829.1
Hypothetical protein.
    
 0.702
SHN29555.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D.
 
 0.684
SHM91308.1
Cytochrome P450.
   
 0.647
SHN46197.1
PTS system, fructose subfamily, IIC component.
  
 0.636
Your Current Organism:
Cryptosporangium aurantiacum
NCBI taxonomy Id: 134849
Other names: Actinoplanes aurantiacus, C. aurantiacum, DSM 46144, IFO 13967, IMET 9261, IMSNU 22120, JCM 3241, KCC A-0241, KCTC 9529, NBRC 13967, NCIMB 12649, NRRL B-16698, strain 71-C38
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